This is a work in progress, probably not yet ready for use!
Varda is an application for storing genomic variation data obtained from next-generation sequencing experiments, such as full-genome or exome sequencing of individuals or populations. Variants can be imported from standard formats such as VCF files and annotated with their frequencies in previously imported datasets.
Varda is implemented as a service exposing a RESTful HTTP interface. Two clients for this interface are under development:
Please see the tutorial for how to get started with all of these components.
This section of the documentation aims to guide users through working with Varda.
Start here if you’re responsible for getting Varda running on a system.
REST API documentation¶
Developers of client applications can read how to communicate with the Varda REST API in this section.
- Introduction to the REST API
- REST API manual
- REST API resources
This part contains some notes for developers and other random notes. It needs work, sorry about that.